Carnation DB

Dca21859.1

Annotation

13-exons
f-1
sp|A9PEC9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_729432#GO:0005783;GO:0005509;GO:0051082;GO:0006457#2F1P1C
sp|B5M6X8_TOBAC#Calreticulin#Nicotiana tabacum (Common tobacco)#unknown#GO:0005783;GO:0005509;GO:0051082;GO:0006457#2F1P1C
Repeat List (scaffold22)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21859.1	36	96	97	31.95	61	51	6e-10
Target_name	Start	End	Length	Cov(%)
sp\|D7U5X7_VITVI	1	61	62	98.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21859.1	14	383	416	75.24	370	85	2e-173
Target_name	Start	End	Length	Cov(%)
AT1G09210.1	11	379	424	87.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold22	Augus-PASA	mRNA	387174	391368	.	-	.	ID=Dca21859.1;Parent=Dca21859
scaffold22	Augus-PASA	exon	387174	387185	.	-	.	ID=Dca21859.1.exon1;Parent=Dca21859.1
scaffold22	Augus-PASA	exon	387286	387366	.	-	.	ID=Dca21859.1.exon2;Parent=Dca21859.1
scaffold22	Augus-PASA	exon	387457	387486	.	-	.	ID=Dca21859.1.exon3;Parent=Dca21859.1
scaffold22	Augus-PASA	exon	387747	387794	.	-	.	ID=Dca21859.1.exon4;Parent=Dca21859.1
scaffold22	Augus-PASA	exon	387905	388000	.	-	.	ID=Dca21859.1.exon5;Parent=Dca21859.1
scaffold22	Augus-PASA	exon	388086	388153	.	-	.	ID=Dca21859.1.exon6;Parent=Dca21859.1
scaffold22	Augus-PASA	exon	388245	388302	.	-	.	ID=Dca21859.1.exon7;Parent=Dca21859.1
scaffold22	Augus-PASA	exon	388402	388488	.	-	.	ID=Dca21859.1.exon8;Parent=Dca21859.1
scaffold22	Augus-PASA	exon	388763	388867	.	-	.	ID=Dca21859.1.exon9;Parent=Dca21859.1
scaffold22	Augus-PASA	exon	388950	389208	.	-	.	ID=Dca21859.1.exon10;Parent=Dca21859.1
scaffold22	Augus-PASA	exon	389309	389501	.	-	.	ID=Dca21859.1.exon11;Parent=Dca21859.1
scaffold22	Augus-PASA	exon	389632	389739	.	-	.	ID=Dca21859.1.exon12;Parent=Dca21859.1
scaffold22	Augus-PASA	exon	391263	391368	.	-	.	ID=Dca21859.1.exon13;Parent=Dca21859.1