Carnation DB

Dca21871.1

Annotation

6-exons
f-1
sp|A9PBL9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_663010#unknown#0F0P0C
AT5G38890.1 | Symbols: | Nucleic acid-binding, OB-fold-like protein | chr5:15569507-15570898 FORWARD LENGTH=191
Repeat List (scaffold22)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21871.1	7	200	200	68	194	69	1e-74
Target_name	Start	End	Length	Cov(%)
sp\|A9PBL9_POPTR	2	199	199	99.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21871.1	12	200	200	67.5	189	71	4e-72
Target_name	Start	End	Length	Cov(%)
AT5G38890.1	5	191	191	97.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold22	Augus-PASA	mRNA	496640	500439	.	+	.	ID=Dca21871.1;Parent=Dca21871
scaffold22	Augus-PASA	exon	496640	496819	.	+	.	ID=Dca21871.1.exon1;Parent=Dca21871.1
scaffold22	Augus-PASA	exon	498240	498314	.	+	.	ID=Dca21871.1.exon2;Parent=Dca21871.1
scaffold22	Augus-PASA	exon	498462	498550	.	+	.	ID=Dca21871.1.exon3;Parent=Dca21871.1
scaffold22	Augustus	exon	499460	499544	.	+	.	ID=Dca21871.1.exon4;Parent=Dca21871.1
scaffold22	Augustus	exon	499816	499897	.	+	.	ID=Dca21871.1.exon5;Parent=Dca21871.1
scaffold22	Augustus	exon	500348	500439	.	+	.	ID=Dca21871.1.exon6;Parent=Dca21871.1