Carnation DB

Dca2194.1

Annotation

8-exons
f-1
sp|F6HNV5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g02000#GO:0003723#1F0P0C
Os01t0844800-01 Similar to Pumilio RBD (Fragment).
Repeat List (scaffold10729)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2194.1	1	912	960	61.04	912	55	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HNV5_VITVI	1	1047	1055	99.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2194.1	22	914	960	50.83	893	47	0
Target_name	Start	End	Length	Cov(%)
Os01t0844800-01	49	1054	1061	94.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10729	Augustus	mRNA	2876	7912	.	+	.	ID=Dca2194.1;Parent=Dca2194
scaffold10729	Augustus	exon	2876	3481	.	+	.	ID=Dca2194.1.exon1;Parent=Dca2194.1
scaffold10729	Augustus	exon	4215	5389	.	+	.	ID=Dca2194.1.exon2;Parent=Dca2194.1
scaffold10729	Augustus	exon	5554	5695	.	+	.	ID=Dca2194.1.exon3;Parent=Dca2194.1
scaffold10729	Augustus	exon	5944	6051	.	+	.	ID=Dca2194.1.exon4;Parent=Dca2194.1
scaffold10729	Augustus	exon	6146	6358	.	+	.	ID=Dca2194.1.exon5;Parent=Dca2194.1
scaffold10729	Augustus	exon	6449	6559	.	+	.	ID=Dca2194.1.exon6;Parent=Dca2194.1
scaffold10729	Augustus	exon	7205	7399	.	+	.	ID=Dca2194.1.exon7;Parent=Dca2194.1
scaffold10729	Augustus	exon	7580	7912	.	+	.	ID=Dca2194.1.exon8;Parent=Dca2194.1