Dca21960.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold221)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21960.1 |
166 |
362 |
366 |
18.57 |
197 |
31 |
2e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
235 |
453 |
1501 |
14.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca21960.1 |
39 |
136 |
366 |
7.92 |
98 |
30 |
9e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
177 |
296 |
33.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold221 |
Augustus |
mRNA |
13018 |
14325 |
. |
+ |
. |
ID=Dca21960.1;Parent=Dca21960 |
| scaffold221 |
Augustus |
exon |
13018 |
13424 |
. |
+ |
. |
ID=Dca21960.1.exon1;Parent=Dca21960.1 |
| scaffold221 |
Augustus |
exon |
13632 |
14325 |
. |
+ |
. |
ID=Dca21960.1.exon2;Parent=Dca21960.1 |
