Carnation DB

Dca21969.1

Annotation

5-exons
f-1
sp|C6T2R2_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0008270#1F0P0C
AT5G20570.2 | Symbols: ROC1, RBX1, HRT1, ATRBX1 | RING-box 1 | chr5:6956905-6958221 REVERSE LENGTH=142
Repeat List (scaffold221)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21969.1	1	115	115	93.91	115	94	6e-60
Target_name	Start	End	Length	Cov(%)
sp\|C6T2R2_SOYBN	4	118	118	97.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21969.1	1	115	115	92.17	115	77	4e-52
Target_name	Start	End	Length	Cov(%)
AT5G20570.2	4	142	142	97.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold221	Augustus	mRNA	90083	93920	.	+	.	ID=Dca21969.1;Parent=Dca21969
scaffold221	Augustus	exon	90083	90209	.	+	.	ID=Dca21969.1.exon1;Parent=Dca21969.1
scaffold221	Augustus	exon	90331	90381	.	+	.	ID=Dca21969.1.exon2;Parent=Dca21969.1
scaffold221	Augustus	exon	90484	90543	.	+	.	ID=Dca21969.1.exon3;Parent=Dca21969.1
scaffold221	Augustus	exon	93677	93748	.	+	.	ID=Dca21969.1.exon4;Parent=Dca21969.1
scaffold221	Augustus	exon	93883	93920	.	+	.	ID=Dca21969.1.exon5;Parent=Dca21969.1