Carnation DB

Dca21972.1

Annotation

6-exons
f-1
sp|A5AJD0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_012031#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold221)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21972.1	122	1220	1326	42.76	1099	46	0
Target_name	Start	End	Length	Cov(%)
sp\|A5AJD0_VITVI	75	1281	1371	88.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca21972.1	120	1233	1326	34.69	1114	38	0
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	131	1310	1539	76.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold221	Augustus	mRNA	119654	124238	.	-	.	ID=Dca21972.1;Parent=Dca21972
scaffold221	Augustus	exon	119654	119973	.	-	.	ID=Dca21972.1.exon1;Parent=Dca21972.1
scaffold221	Augustus	exon	120211	120436	.	-	.	ID=Dca21972.1.exon2;Parent=Dca21972.1
scaffold221	Augustus	exon	120522	120799	.	-	.	ID=Dca21972.1.exon3;Parent=Dca21972.1
scaffold221	Augustus	exon	120888	121831	.	-	.	ID=Dca21972.1.exon4;Parent=Dca21972.1
scaffold221	Augustus	exon	121929	122617	.	-	.	ID=Dca21972.1.exon5;Parent=Dca21972.1
scaffold221	Augustus	exon	122715	124238	.	-	.	ID=Dca21972.1.exon6;Parent=Dca21972.1