Carnation DB

Dca22012.1

Annotation

5-exons
f-1
sp|F6HKM2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g03140#GO:0005622;GO:0007165#0F1P1C
AT5G22400.1 | Symbols: | Rho GTPase activating protein with PAK-box/P21-Rho-binding domain | chr5:7423050-7425335 REVERSE LENGTH=466
Repeat List (scaffold2213)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22012.1	80	485	485	51.75	406	55	6e-128
Target_name	Start	End	Length	Cov(%)
sp\|F6HKM2_VITVI	90	533	533	83.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22012.1	80	485	485	47.83	406	57	8e-118
Target_name	Start	End	Length	Cov(%)
AT5G22400.1	89	466	466	81.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2213	Augustus	mRNA	2036	4046	.	-	.	ID=Dca22012.1;Parent=Dca22012
scaffold2213	Augustus	exon	2036	2536	.	-	.	ID=Dca22012.1.exon1;Parent=Dca22012.1
scaffold2213	Augustus	exon	2613	2843	.	-	.	ID=Dca22012.1.exon2;Parent=Dca22012.1
scaffold2213	Augus-PASA	exon	3014	3133	.	-	.	ID=Dca22012.1.exon3;Parent=Dca22012.1
scaffold2213	Augus-PASA	exon	3237	3357	.	-	.	ID=Dca22012.1.exon4;Parent=Dca22012.1
scaffold2213	Augus-PASA	exon	3562	4046	.	-	.	ID=Dca22012.1.exon5;Parent=Dca22012.1