Carnation DB

Dca22028.1

Annotation

5-exons
f-1
sp|G5DXF3_SILLA#Chorismate mutase#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0004106;GO:0009073#1F1P0C
Repeat List (scaffold2214)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22028.1	2	257	257	85.6	256	86	2e-122
Target_name	Start	End	Length	Cov(%)
sp\|G5DXF3_SILLA	11	266	266	96.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22028.1	2	257	257	69.26	256	68	2e-105
Target_name	Start	End	Length	Cov(%)
AT3G29200.1	79	340	340	77.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2214	Augustus	mRNA	19839	23477	.	+	.	ID=Dca22028.1;Parent=Dca22028
scaffold2214	Augustus	exon	19839	20048	.	+	.	ID=Dca22028.1.exon1;Parent=Dca22028.1
scaffold2214	Augustus	exon	20143	20229	.	+	.	ID=Dca22028.1.exon2;Parent=Dca22028.1
scaffold2214	Augustus	exon	20514	20657	.	+	.	ID=Dca22028.1.exon3;Parent=Dca22028.1
scaffold2214	Augustus	exon	22671	22763	.	+	.	ID=Dca22028.1.exon4;Parent=Dca22028.1
scaffold2214	Augustus	exon	23238	23477	.	+	.	ID=Dca22028.1.exon5;Parent=Dca22028.1