Carnation DB

Dca22107.1

Annotation

7-exons
f-1
sp|Q5GA69_SOLLC#Putative polyprotein#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#unknown#0F0P0C
Repeat List (scaffold2220)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22107.1	1	272	426	50.23	272	71	5e-120
Target_name	Start	End	Length	Cov(%)
sp\|Q5GA69_SOLLC	372	673	687	43.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22107.1	1	276	426	24.64	276	35	3e-45
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	1086	1384	1401	21.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2220	Augustus	mRNA	32076	38208	.	+	.	ID=Dca22107.1;Parent=Dca22107
scaffold2220	Augustus	exon	32076	32472	.	+	.	ID=Dca22107.1.exon1;Parent=Dca22107.1
scaffold2220	Augustus	exon	32563	32982	.	+	.	ID=Dca22107.1.exon2;Parent=Dca22107.1
scaffold2220	Augustus	exon	34650	34723	.	+	.	ID=Dca22107.1.exon3;Parent=Dca22107.1
scaffold2220	Augustus	exon	34952	35075	.	+	.	ID=Dca22107.1.exon4;Parent=Dca22107.1
scaffold2220	Augustus	exon	35617	35675	.	+	.	ID=Dca22107.1.exon5;Parent=Dca22107.1
scaffold2220	Augustus	exon	35764	35847	.	+	.	ID=Dca22107.1.exon6;Parent=Dca22107.1
scaffold2220	Augustus	exon	38086	38208	.	+	.	ID=Dca22107.1.exon7;Parent=Dca22107.1