Dca22250.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold22323)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22250.1 |
59 |
175 |
177 |
32.2 |
117 |
44 |
1e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
362 |
486 |
964 |
12.96 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22250.1 |
114 |
175 |
177 |
14.12 |
62 |
41 |
1e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
872 |
930 |
1401 |
4.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold22323 |
Augustus |
mRNA |
103 |
1689 |
. |
- |
. |
ID=Dca22250.1;Parent=Dca22250 |
| scaffold22323 |
Augustus |
exon |
103 |
461 |
. |
- |
. |
ID=Dca22250.1.exon1;Parent=Dca22250.1 |
| scaffold22323 |
Augustus |
exon |
1515 |
1689 |
. |
- |
. |
ID=Dca22250.1.exon2;Parent=Dca22250.1 |
