Carnation DB

Dca22328.1

Annotation

33-exons
f-1
sp|B9SDQ1_RICCO#Ubiquitin carboxyl-terminal hydrolase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0423090#GO:0004221;GO:0006511#1F1P0C
Repeat List (scaffold224)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22328.1	610	1185	1195	38.32	576	72	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SDQ1_RICCO	465	1103	1120	57.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22328.1	610	1185	1195	37.65	576	71	0
Target_name	Start	End	Length	Cov(%)
AT5G06600.1	468	1104	1116	57.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold224	Augus-PASA	mRNA	141657	153161	.	-	.	ID=Dca22328.1;Parent=Dca22328
scaffold224	Augus-PASA	exon	141657	141692	.	-	.	ID=Dca22328.1.exon1;Parent=Dca22328.1
scaffold224	Augus-PASA	exon	141953	142039	.	-	.	ID=Dca22328.1.exon2;Parent=Dca22328.1
scaffold224	Augus-PASA	exon	142119	142193	.	-	.	ID=Dca22328.1.exon3;Parent=Dca22328.1
scaffold224	Augus-PASA	exon	142320	142436	.	-	.	ID=Dca22328.1.exon4;Parent=Dca22328.1
scaffold224	Augus-PASA	exon	142628	142714	.	-	.	ID=Dca22328.1.exon5;Parent=Dca22328.1
scaffold224	Augus-PASA	exon	142896	142961	.	-	.	ID=Dca22328.1.exon6;Parent=Dca22328.1
scaffold224	Augus-PASA	exon	143064	143129	.	-	.	ID=Dca22328.1.exon7;Parent=Dca22328.1
scaffold224	Augus-PASA	exon	143435	143506	.	-	.	ID=Dca22328.1.exon8;Parent=Dca22328.1
scaffold224	Augus-PASA	exon	143607	143708	.	-	.	ID=Dca22328.1.exon9;Parent=Dca22328.1
scaffold224	Augustus	exon	143798	143975	.	-	.	ID=Dca22328.1.exon10;Parent=Dca22328.1
scaffold224	Augustus	exon	144116	144171	.	-	.	ID=Dca22328.1.exon11;Parent=Dca22328.1
scaffold224	Augustus	exon	144869	144977	.	-	.	ID=Dca22328.1.exon12;Parent=Dca22328.1
scaffold224	Augustus	exon	145064	145152	.	-	.	ID=Dca22328.1.exon13;Parent=Dca22328.1
scaffold224	Augustus	exon	145242	145310	.	-	.	ID=Dca22328.1.exon14;Parent=Dca22328.1
scaffold224	Augustus	exon	145617	145739	.	-	.	ID=Dca22328.1.exon15;Parent=Dca22328.1
scaffold224	Augustus	exon	146133	146252	.	-	.	ID=Dca22328.1.exon16;Parent=Dca22328.1
scaffold224	Augustus	exon	146353	146433	.	-	.	ID=Dca22328.1.exon17;Parent=Dca22328.1
scaffold224	Augustus	exon	146513	146659	.	-	.	ID=Dca22328.1.exon18;Parent=Dca22328.1
scaffold224	Augustus	exon	146739	146817	.	-	.	ID=Dca22328.1.exon19;Parent=Dca22328.1
scaffold224	Augustus	exon	147120	147256	.	-	.	ID=Dca22328.1.exon20;Parent=Dca22328.1
scaffold224	Augustus	exon	147357	147437	.	-	.	ID=Dca22328.1.exon21;Parent=Dca22328.1
scaffold224	Augustus	exon	147517	147663	.	-	.	ID=Dca22328.1.exon22;Parent=Dca22328.1
scaffold224	Augustus	exon	147743	147821	.	-	.	ID=Dca22328.1.exon23;Parent=Dca22328.1
scaffold224	Augustus	exon	148016	148090	.	-	.	ID=Dca22328.1.exon24;Parent=Dca22328.1
scaffold224	Augustus	exon	150413	150522	.	-	.	ID=Dca22328.1.exon25;Parent=Dca22328.1
scaffold224	Augustus	exon	150662	150760	.	-	.	ID=Dca22328.1.exon26;Parent=Dca22328.1
scaffold224	Augustus	exon	150855	150970	.	-	.	ID=Dca22328.1.exon27;Parent=Dca22328.1
scaffold224	Augustus	exon	151066	151174	.	-	.	ID=Dca22328.1.exon28;Parent=Dca22328.1
scaffold224	Augustus	exon	151261	151479	.	-	.	ID=Dca22328.1.exon29;Parent=Dca22328.1
scaffold224	Augustus	exon	151584	151849	.	-	.	ID=Dca22328.1.exon30;Parent=Dca22328.1
scaffold224	Augustus	exon	152283	152440	.	-	.	ID=Dca22328.1.exon31;Parent=Dca22328.1
scaffold224	Augustus	exon	152535	152682	.	-	.	ID=Dca22328.1.exon32;Parent=Dca22328.1
scaffold224	Augustus	exon	153077	153161	.	-	.	ID=Dca22328.1.exon33;Parent=Dca22328.1