Dca22336.1
Annotation
- 4-exons
- f-1
- sp|A9PBT5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_648993, POPTRDRAFT_827216#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- sp|B9RUQ4_RICCO#60S ribosomal protein L30, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0855600#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- Repeat List (scaffold224)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22336.1 |
1 |
112 |
112 |
91.96 |
112 |
92 |
7e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PBT5_POPTR |
1 |
112 |
112 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22336.1 |
1 |
112 |
112 |
83.03 |
112 |
84 |
3e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G36240.1 |
1 |
112 |
112 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold224 |
Augus-PASA |
mRNA |
198612 |
200651 |
. |
+ |
. |
ID=Dca22336.1;Parent=Dca22336 |
| scaffold224 |
Augus-PASA |
exon |
198612 |
198632 |
. |
+ |
. |
ID=Dca22336.1.exon1;Parent=Dca22336.1 |
| scaffold224 |
Augus-PASA |
exon |
199344 |
199449 |
. |
+ |
. |
ID=Dca22336.1.exon2;Parent=Dca22336.1 |
| scaffold224 |
Augus-PASA |
exon |
200262 |
200363 |
. |
+ |
. |
ID=Dca22336.1.exon3;Parent=Dca22336.1 |
| scaffold224 |
Augus-PASA |
exon |
200542 |
200651 |
. |
+ |
. |
ID=Dca22336.1.exon4;Parent=Dca22336.1 |
