Dca22404.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2247)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22404.1 |
42 |
662 |
662 |
50.45 |
621 |
47 |
3e-173
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
103 |
815 |
1501 |
47.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22404.1 |
145 |
662 |
662 |
28.24 |
518 |
35 |
2e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
333 |
841 |
1539 |
33.07 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2247 |
Augustus |
mRNA |
97309 |
100074 |
. |
- |
. |
ID=Dca22404.1;Parent=Dca22404 |
| scaffold2247 |
Augustus |
exon |
97309 |
98018 |
. |
- |
. |
ID=Dca22404.1.exon1;Parent=Dca22404.1 |
| scaffold2247 |
Augustus |
exon |
98088 |
99030 |
. |
- |
. |
ID=Dca22404.1.exon2;Parent=Dca22404.1 |
| scaffold2247 |
Augustus |
exon |
99115 |
99347 |
. |
- |
. |
ID=Dca22404.1.exon3;Parent=Dca22404.1 |
| scaffold2247 |
Augustus |
exon |
99972 |
100074 |
. |
- |
. |
ID=Dca22404.1.exon4;Parent=Dca22404.1 |
