Dca22410.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold22479)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22410.1 |
2 |
187 |
193 |
64.76 |
186 |
57 |
3e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
135 |
354 |
964 |
22.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22410.1 |
2 |
180 |
193 |
38.34 |
179 |
35 |
1e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
549 |
764 |
1428 |
15.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold22479 |
Augustus |
mRNA |
348 |
1031 |
. |
- |
. |
ID=Dca22410.1;Parent=Dca22410 |
| scaffold22479 |
Augustus |
exon |
348 |
604 |
. |
- |
. |
ID=Dca22410.1.exon1;Parent=Dca22410.1 |
| scaffold22479 |
Augustus |
exon |
707 |
1031 |
. |
- |
. |
ID=Dca22410.1.exon2;Parent=Dca22410.1 |
