Carnation DB

Dca22448.1

Annotation

5-exons
f-1
sp|B9SGD5_RICCO#Run and tbc1 domain containing 3, plant, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0744140#GO:0005622;GO:0005097#1F0P1C
Repeat List (scaffold225)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22448.1	1	135	151	61.58	135	67	1e-43
Target_name	Start	End	Length	Cov(%)
sp\|B9SGD5_RICCO	657	794	845	16.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22448.1	1	126	151	47.68	126	54	4e-28
Target_name	Start	End	Length	Cov(%)
Os01t0835000-01	629	763	825	16.36

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold225	Augus-PASA	mRNA	172701	177842	.	-	.	ID=Dca22448.1;Parent=Dca22448
scaffold225	Augus-PASA	exon	172701	172814	.	-	.	ID=Dca22448.1.exon1;Parent=Dca22448.1
scaffold225	Augus-PASA	exon	177190	177295	.	-	.	ID=Dca22448.1.exon2;Parent=Dca22448.1
scaffold225	Augus-PASA	exon	177430	177554	.	-	.	ID=Dca22448.1.exon3;Parent=Dca22448.1
scaffold225	Augus-PASA	exon	177649	177750	.	-	.	ID=Dca22448.1.exon4;Parent=Dca22448.1
scaffold225	Augustus	exon	177834	177842	.	-	.	ID=Dca22448.1.exon5;Parent=Dca22448.1