Carnation DB

Dca22450.1

Annotation

6-exons
f-1
sp|B9HM18_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_563817#unknown#0F0P0C
sp|B9SGF0_RICCO#Erythroblast macrophage protein emp, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0744890#unknown#0F0P0C
Repeat List (scaffold225)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22450.1	1	246	265	67.16	246	73	9e-98
Target_name	Start	End	Length	Cov(%)
sp\|B9HM18_POPTR	1	239	412	58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22450.1	1	249	265	60.75	249	65	2e-90
Target_name	Start	End	Length	Cov(%)
AT3G55070.1	1	242	418	57.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold225	Augus-PASA	mRNA	191378	195722	.	+	.	ID=Dca22450.1;Parent=Dca22450
scaffold225	Augus-PASA	exon	191378	191710	.	+	.	ID=Dca22450.1.exon1;Parent=Dca22450.1
scaffold225	Augus-PASA	exon	192038	192232	.	+	.	ID=Dca22450.1.exon2;Parent=Dca22450.1
scaffold225	Augus-PASA	exon	192948	193070	.	+	.	ID=Dca22450.1.exon3;Parent=Dca22450.1
scaffold225	Augustus	exon	194512	194596	.	+	.	ID=Dca22450.1.exon4;Parent=Dca22450.1
scaffold225	Augustus	exon	194670	194697	.	+	.	ID=Dca22450.1.exon5;Parent=Dca22450.1
scaffold225	Augustus	exon	195689	195722	.	+	.	ID=Dca22450.1.exon6;Parent=Dca22450.1