Dca22503.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold2257)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22503.1 |
163 |
623 |
623 |
42.21 |
461 |
57 |
3e-151
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
54 |
517 |
964 |
48.13 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22503.1 |
132 |
622 |
623 |
27.76 |
491 |
32 |
4e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
412 |
960 |
1401 |
39.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2257 |
Augustus |
mRNA |
53299 |
56142 |
. |
- |
. |
ID=Dca22503.1;Parent=Dca22503 |
| scaffold2257 |
Augustus |
exon |
53299 |
54692 |
. |
- |
. |
ID=Dca22503.1.exon1;Parent=Dca22503.1 |
| scaffold2257 |
Augustus |
exon |
54927 |
55076 |
. |
- |
. |
ID=Dca22503.1.exon2;Parent=Dca22503.1 |
| scaffold2257 |
Augustus |
exon |
55815 |
56142 |
. |
- |
. |
ID=Dca22503.1.exon3;Parent=Dca22503.1 |
