Dca22557.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold226)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22557.1 |
195 |
447 |
467 |
21.62 |
253 |
40 |
4e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
15 |
261 |
1717 |
14.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22557.1 |
85 |
138 |
467 |
8.77 |
54 |
76 |
6e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G52510.1 |
94 |
147 |
380 |
14.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold226 |
Augustus |
mRNA |
230575 |
235584 |
. |
- |
. |
ID=Dca22557.1;Parent=Dca22557 |
| scaffold226 |
Augustus |
exon |
230575 |
231564 |
. |
- |
. |
ID=Dca22557.1.exon1;Parent=Dca22557.1 |
| scaffold226 |
Augustus |
exon |
233367 |
233452 |
. |
- |
. |
ID=Dca22557.1.exon2;Parent=Dca22557.1 |
| scaffold226 |
Augustus |
exon |
233546 |
233621 |
. |
- |
. |
ID=Dca22557.1.exon3;Parent=Dca22557.1 |
| scaffold226 |
Augustus |
exon |
235333 |
235584 |
. |
- |
. |
ID=Dca22557.1.exon4;Parent=Dca22557.1 |
