Carnation DB

Dca22574.1

Annotation

6-exons
f-1
sp|B9H7D3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_209861#unknown#0F0P0C
sp|B9RJ74_RICCO#Cation transport protein chaC, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1031950#unknown#0F0P0C
Repeat List (scaffold2261)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22574.1	4	131	154	62.98	128	76	4e-54
Target_name	Start	End	Length	Cov(%)
sp\|B9H7D3_POPTR	35	162	182	70.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22574.1	4	131	154	57.79	128	70	3e-50
Target_name	Start	End	Length	Cov(%)
AT1G44790.1	37	164	199	64.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2261	Augustus	mRNA	38321	39976	.	-	.	ID=Dca22574.1;Parent=Dca22574
scaffold2261	Augustus	exon	38321	38474	.	-	.	ID=Dca22574.1.exon1;Parent=Dca22574.1
scaffold2261	Augus-PASA	exon	38645	38716	.	-	.	ID=Dca22574.1.exon2;Parent=Dca22574.1
scaffold2261	Augus-PASA	exon	38799	38839	.	-	.	ID=Dca22574.1.exon3;Parent=Dca22574.1
scaffold2261	Augus-PASA	exon	38954	39010	.	-	.	ID=Dca22574.1.exon4;Parent=Dca22574.1
scaffold2261	Augus-PASA	exon	39121	39174	.	-	.	ID=Dca22574.1.exon5;Parent=Dca22574.1
scaffold2261	Augustus	exon	39890	39976	.	-	.	ID=Dca22574.1.exon6;Parent=Dca22574.1