Dca22578.1
Annotation
- 3-exons
- f-1
- sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold2262)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22578.1 |
378 |
1188 |
1202 |
25.12 |
811 |
36 |
2e-148
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG3_BETVU |
62 |
900 |
1114 |
75.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22578.1 |
453 |
1163 |
1202 |
18.71 |
711 |
30 |
3e-85
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
63 |
789 |
857 |
84.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2262 |
Augustus |
mRNA |
11669 |
15596 |
. |
+ |
. |
ID=Dca22578.1;Parent=Dca22578 |
| scaffold2262 |
Augustus |
exon |
11669 |
12856 |
. |
+ |
. |
ID=Dca22578.1.exon1;Parent=Dca22578.1 |
| scaffold2262 |
Augustus |
exon |
13101 |
14247 |
. |
+ |
. |
ID=Dca22578.1.exon2;Parent=Dca22578.1 |
| scaffold2262 |
Augustus |
exon |
14323 |
15596 |
. |
+ |
. |
ID=Dca22578.1.exon3;Parent=Dca22578.1 |
