Dca22579.1
Annotation
- 3-exons
- f-1
- sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold2262)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22579.1 |
369 |
1285 |
1298 |
27.73 |
917 |
39 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG3_BETVU |
3 |
920 |
1114 |
82.4 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22579.1 |
475 |
1245 |
1298 |
18.02 |
771 |
30 |
3e-96
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
32 |
794 |
857 |
89.03 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2262 |
Augustus |
mRNA |
16769 |
21022 |
. |
- |
. |
ID=Dca22579.1;Parent=Dca22579 |
| scaffold2262 |
Augustus |
exon |
16769 |
16782 |
. |
- |
. |
ID=Dca22579.1.exon1;Parent=Dca22579.1 |
| scaffold2262 |
Augustus |
exon |
17058 |
19875 |
. |
- |
. |
ID=Dca22579.1.exon2;Parent=Dca22579.1 |
| scaffold2262 |
Augustus |
exon |
19958 |
21022 |
. |
- |
. |
ID=Dca22579.1.exon3;Parent=Dca22579.1 |
