Dca22619.1
Annotation
- 4-exons
- f-262
- sp|A9PGH8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_836632#GO:0005524;GO:0004713#2F0P0C
- Os03t0226300-01 Similar to Pto kinase interactor 1.
- Repeat List (scaffold2267)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22619.1 |
1 |
51 |
55 |
56.36 |
51 |
61 |
1e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HA11_POPTR |
184 |
229 |
363 |
12.67 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22619.1 |
1 |
46 |
55 |
54.54 |
46 |
66 |
1e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0226300-01 |
187 |
227 |
365 |
11.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2267 |
Augustus |
mRNA |
48118 |
48883 |
. |
- |
. |
ID=Dca22619.1;Parent=Dca22619 |
| scaffold2267 |
Augustus |
exon |
48118 |
48216 |
. |
- |
. |
ID=Dca22619.1.exon1;Parent=Dca22619.1 |
| scaffold2267 |
Augustus |
exon |
48328 |
48414 |
. |
- |
. |
ID=Dca22619.1.exon2;Parent=Dca22619.1 |
| scaffold2267 |
Augustus |
exon |
48485 |
48611 |
. |
- |
. |
ID=Dca22619.1.exon3;Parent=Dca22619.1 |
| scaffold2267 |
Augustus |
exon |
48717 |
48883 |
. |
- |
. |
ID=Dca22619.1.exon4;Parent=Dca22619.1 |
