Dca22656.1
Annotation
- 3-exons
- f-1
- sp|B9N2Z5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_670618#GO:0016020;GO:0048193#0F1P1C
- AT4G30240.1 | Symbols: | Syntaxin/t-SNARE family protein | chr4:14808359-14809745 REVERSE LENGTH=300
- Repeat List (scaffold227)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22656.1 |
1 |
162 |
173 |
60.69 |
162 |
65 |
7e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N2Z5_POPTR |
1 |
161 |
290 |
55.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22656.1 |
1 |
152 |
173 |
58.38 |
152 |
67 |
3e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G30240.1 |
1 |
151 |
300 |
50.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold227 |
Augustus |
mRNA |
125222 |
126921 |
. |
- |
. |
ID=Dca22656.1;Parent=Dca22656 |
| scaffold227 |
Augustus |
exon |
125222 |
125545 |
. |
- |
. |
ID=Dca22656.1.exon1;Parent=Dca22656.1 |
| scaffold227 |
Augus-PASA |
exon |
125719 |
125833 |
. |
- |
. |
ID=Dca22656.1.exon2;Parent=Dca22656.1 |
| scaffold227 |
Augus-PASA |
exon |
126839 |
126921 |
. |
- |
. |
ID=Dca22656.1.exon3;Parent=Dca22656.1 |
