Dca22665.1
Annotation
- 4-exons
- f-1
- sp|B9H473_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_650590#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- AT5G64650.1 | Symbols: | Ribosomal protein L17 family protein | chr5:25839542-25840775 REVERSE LENGTH=160
- Repeat List (scaffold227)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22665.1 |
37 |
120 |
120 |
59.16 |
84 |
82 |
3e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H473_POPTR |
74 |
160 |
160 |
54.37 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22665.1 |
37 |
120 |
120 |
55.83 |
84 |
78 |
3e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G64650.1 |
74 |
160 |
160 |
54.37 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold227 |
Augustus |
mRNA |
162151 |
163446 |
. |
+ |
. |
ID=Dca22665.1;Parent=Dca22665 |
| scaffold227 |
Augustus |
exon |
162151 |
162194 |
. |
+ |
. |
ID=Dca22665.1.exon1;Parent=Dca22665.1 |
| scaffold227 |
Augustus |
exon |
162810 |
162908 |
. |
+ |
. |
ID=Dca22665.1.exon2;Parent=Dca22665.1 |
| scaffold227 |
Augustus |
exon |
163008 |
163076 |
. |
+ |
. |
ID=Dca22665.1.exon3;Parent=Dca22665.1 |
| scaffold227 |
Augustus |
exon |
163296 |
163446 |
. |
+ |
. |
ID=Dca22665.1.exon4;Parent=Dca22665.1 |
