Carnation DB

Dca22667.1

Annotation

6-exons
f-1
sp|B9HRB6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_821121#GO:0016021;GO:0046923;GO:0006621#1F1P1C
sp|B9STD7_RICCO#ER lumen protein retaining receptor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0661410#GO:0016021;GO:0046923;GO:0004872;GO:0006621#2F1P1C
Repeat List (scaffold227)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22667.1	1	272	272	86.39	272	87	4e-140
Target_name	Start	End	Length	Cov(%)
sp\|B9HRB6_POPTR	1	272	272	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22667.1	5	272	272	84.92	268	87	8e-136
Target_name	Start	End	Length	Cov(%)
AT4G38790.1	6	273	273	98.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold227	Augus-PASA	mRNA	175991	178687	.	+	.	ID=Dca22667.1;Parent=Dca22667
scaffold227	Augus-PASA	exon	175991	176213	.	+	.	ID=Dca22667.1.exon1;Parent=Dca22667.1
scaffold227	Augus-PASA	exon	177687	177886	.	+	.	ID=Dca22667.1.exon2;Parent=Dca22667.1
scaffold227	Augus-PASA	exon	177977	178117	.	+	.	ID=Dca22667.1.exon3;Parent=Dca22667.1
scaffold227	Augus-PASA	exon	178196	178276	.	+	.	ID=Dca22667.1.exon4;Parent=Dca22667.1
scaffold227	Augus-PASA	exon	178397	178521	.	+	.	ID=Dca22667.1.exon5;Parent=Dca22667.1
scaffold227	Augus-PASA	exon	178639	178687	.	+	.	ID=Dca22667.1.exon6;Parent=Dca22667.1