Dca22779.1
Annotation
- 3-exons
- f-1
- sp|D7MA38_ARALL#Serine hydroxymethyltransferase#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_491471#GO:0004372;GO:0030170;GO:0006544;GO:0006563;GO:0006730#2F3P0C
- Repeat List (scaffold228)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22779.1 |
43 |
146 |
168 |
50 |
104 |
71 |
3e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7MA38_ARALL |
75 |
193 |
530 |
22.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22779.1 |
43 |
146 |
168 |
50 |
104 |
71 |
3e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G32520.1 |
75 |
193 |
529 |
22.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold228 |
Augustus |
mRNA |
202852 |
204967 |
. |
+ |
. |
ID=Dca22779.1;Parent=Dca22779 |
| scaffold228 |
Augustus |
exon |
202852 |
202971 |
. |
+ |
. |
ID=Dca22779.1.exon1;Parent=Dca22779.1 |
| scaffold228 |
Augustus |
exon |
204451 |
204647 |
. |
+ |
. |
ID=Dca22779.1.exon2;Parent=Dca22779.1 |
| scaffold228 |
Augustus |
exon |
204778 |
204967 |
. |
+ |
. |
ID=Dca22779.1.exon3;Parent=Dca22779.1 |
