Carnation DB

Dca22854.1

Annotation

5-exons
f-2
sp|F6HZ37_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g00250#unknown#0F0P0C
Os08t0359500-01 CS domain domain containing protein.
Repeat List (scaffold229)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22854.1	1	135	215	45.58	135	73	3e-52
Target_name	Start	End	Length	Cov(%)
sp\|F6HZ37_VITVI	38	173	224	60.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22854.1	1	127	215	38.6	127	65	1e-44
Target_name	Start	End	Length	Cov(%)
Os08t0359500-01	3	128	214	58.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold229	Augustus	mRNA	13009	14482	.	+	.	ID=Dca22854.1;Parent=Dca22854
scaffold229	Augustus	exon	13009	13195	.	+	.	ID=Dca22854.1.exon1;Parent=Dca22854.1
scaffold229	Augus-PASA	exon	13647	13797	.	+	.	ID=Dca22854.1.exon2;Parent=Dca22854.1
scaffold229	Augus-PASA	exon	13909	13946	.	+	.	ID=Dca22854.1.exon3;Parent=Dca22854.1
scaffold229	Augus-PASA	exon	14029	14188	.	+	.	ID=Dca22854.1.exon4;Parent=Dca22854.1
scaffold229	Augus-PASA	exon	14370	14482	.	+	.	ID=Dca22854.1.exon5;Parent=Dca22854.1