Carnation DB

Dca22860.1

Annotation

9-exons
f-1
sp|D7U260_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g00100#GO:0005488#1F0P0C
AT1G02910.1 | Symbols: LPA1 | tetratricopeptide repeat (TPR)-containing protein | chr1:655749-658125 REVERSE LENGTH=453
Repeat List (scaffold229)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22860.1	9	371	371	78.7	363	81	1e-173
Target_name	Start	End	Length	Cov(%)
sp\|D7U260_VITVI	74	436	436	83.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22860.1	9	371	371	73.58	363	76	2e-159
Target_name	Start	End	Length	Cov(%)
AT1G02910.1	91	453	453	80.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold229	Augustus	mRNA	57473	60576	.	-	.	ID=Dca22860.1;Parent=Dca22860
scaffold229	Augustus	exon	57473	57547	.	-	.	ID=Dca22860.1.exon1;Parent=Dca22860.1
scaffold229	Augustus	exon	57879	57975	.	-	.	ID=Dca22860.1.exon2;Parent=Dca22860.1
scaffold229	Augustus	exon	58239	58339	.	-	.	ID=Dca22860.1.exon3;Parent=Dca22860.1
scaffold229	Augustus	exon	58757	58945	.	-	.	ID=Dca22860.1.exon4;Parent=Dca22860.1
scaffold229	Augustus	exon	59232	59389	.	-	.	ID=Dca22860.1.exon5;Parent=Dca22860.1
scaffold229	Augustus	exon	59506	59737	.	-	.	ID=Dca22860.1.exon6;Parent=Dca22860.1
scaffold229	Augustus	exon	59851	59986	.	-	.	ID=Dca22860.1.exon7;Parent=Dca22860.1
scaffold229	Augustus	exon	60277	60380	.	-	.	ID=Dca22860.1.exon8;Parent=Dca22860.1
scaffold229	Augustus	exon	60553	60576	.	-	.	ID=Dca22860.1.exon9;Parent=Dca22860.1