Carnation DB

Dca22882.1

Annotation

5-exons
f-1
sp|Q84MQ3_ORYSJ#Putative reverse transcriptase#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0030J19.11#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Repeat List (scaffold2290)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22882.1	35	219	253	25.69	185	35	2e-18
Target_name	Start	End	Length	Cov(%)
sp\|B9RHJ1_RICCO	7	172	185	89.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22882.1	91	219	253	16.99	129	33	6e-12
Target_name	Start	End	Length	Cov(%)
AT2G13980.1	12	141	171	76.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2290	Augustus	mRNA	7387	10246	.	+	.	ID=Dca22882.1;Parent=Dca22882
scaffold2290	Augustus	exon	7387	7494	.	+	.	ID=Dca22882.1.exon1;Parent=Dca22882.1
scaffold2290	Augustus	exon	7704	8044	.	+	.	ID=Dca22882.1.exon2;Parent=Dca22882.1
scaffold2290	Augustus	exon	8315	8802	.	+	.	ID=Dca22882.1.exon3;Parent=Dca22882.1
scaffold2290	Augustus	exon	9046	9265	.	+	.	ID=Dca22882.1.exon4;Parent=Dca22882.1
scaffold2290	Augustus	exon	9361	10246	.	+	.	ID=Dca22882.1.exon5;Parent=Dca22882.1