Dca22888.1
Annotation
- 4-exons
- f-3
- sp|D7L632_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_478029#GO:0030127;GO:0008270;GO:0006888;GO:0006886#1F2P1C
- Repeat List (scaffold22909)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22888.1 |
61 |
135 |
135 |
30.37 |
75 |
54 |
6e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L632_ARALL |
886 |
958 |
1036 |
7.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22888.1 |
61 |
135 |
135 |
31.85 |
75 |
57 |
2e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G07100.1 |
888 |
960 |
1038 |
7.03 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold22909 |
Augustus |
mRNA |
1 |
735 |
. |
- |
. |
ID=Dca22888.1;Parent=Dca22888 |
| scaffold22909 |
Augustus |
exon |
1 |
191 |
. |
- |
. |
ID=Dca22888.1.exon1;Parent=Dca22888.1 |
| scaffold22909 |
Augustus |
exon |
291 |
354 |
. |
- |
. |
ID=Dca22888.1.exon2;Parent=Dca22888.1 |
| scaffold22909 |
Augustus |
exon |
454 |
502 |
. |
- |
. |
ID=Dca22888.1.exon3;Parent=Dca22888.1 |
| scaffold22909 |
Augustus |
exon |
631 |
735 |
. |
- |
. |
ID=Dca22888.1.exon4;Parent=Dca22888.1 |
