Dca22900.1
Annotation
- 4-exons
- f-1
- sp|Q2QUU1_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g15100#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold2291)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22900.1 |
207 |
529 |
529 |
20.98 |
323 |
35 |
1e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QUU1_ORYSJ |
90 |
393 |
1112 |
27.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2291 |
Augustus |
mRNA |
89875 |
93612 |
. |
+ |
. |
ID=Dca22900.1;Parent=Dca22900 |
| scaffold2291 |
Augustus |
exon |
89875 |
90359 |
. |
+ |
. |
ID=Dca22900.1.exon1;Parent=Dca22900.1 |
| scaffold2291 |
Augustus |
exon |
90680 |
91308 |
. |
+ |
. |
ID=Dca22900.1.exon2;Parent=Dca22900.1 |
| scaffold2291 |
Augustus |
exon |
92924 |
92971 |
. |
+ |
. |
ID=Dca22900.1.exon3;Parent=Dca22900.1 |
| scaffold2291 |
Augustus |
exon |
93185 |
93612 |
. |
+ |
. |
ID=Dca22900.1.exon4;Parent=Dca22900.1 |
