Carnation DB

Dca22908.1

Annotation

6-exons
f-1
sp|D7MB15_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_490928#GO:0003676;GO:0008270#2F0P0C
AT1G65660.1 | Symbols: SMP1 | Pre-mRNA splicing Prp18-interacting factor | chr1:24418295-24421231 REVERSE LENGTH=535
Repeat List (scaffold2292)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22908.1	1	358	366	75.4	358	75	2e-154
Target_name	Start	End	Length	Cov(%)
sp\|D7MB15_ARALL	1	369	536	68.84

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22908.1	1	358	366	74.59	358	74	1e-154
Target_name	Start	End	Length	Cov(%)
AT1G65660.1	1	369	535	68.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2292	Augustus	mRNA	31326	33798	.	+	.	ID=Dca22908.1;Parent=Dca22908
scaffold2292	Augustus	exon	31326	31341	.	+	.	ID=Dca22908.1.exon1;Parent=Dca22908.1
scaffold2292	Augustus	exon	31872	32038	.	+	.	ID=Dca22908.1.exon2;Parent=Dca22908.1
scaffold2292	Augustus	exon	32132	32244	.	+	.	ID=Dca22908.1.exon3;Parent=Dca22908.1
scaffold2292	Augustus	exon	32802	33205	.	+	.	ID=Dca22908.1.exon4;Parent=Dca22908.1
scaffold2292	Augustus	exon	33318	33427	.	+	.	ID=Dca22908.1.exon5;Parent=Dca22908.1
scaffold2292	Augustus	exon	33508	33798	.	+	.	ID=Dca22908.1.exon6;Parent=Dca22908.1