Carnation DB

Dca22915.1

Annotation

11-exons
f-1
sp|B9HTH1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_833809#unknown#0F0P0C
sp|B9T001_RICCO#WD-repeat protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0039940#unknown#0F0P0C
Repeat List (scaffold2293)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22915.1	160	560	560	59.1	401	82	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HTH1_POPTR	84	485	485	82.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22915.1	160	560	560	57.67	401	79	2e-178
Target_name	Start	End	Length	Cov(%)
AT5G13840.1	74	481	481	84.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2293	Augus-PASA	mRNA	30663	35710	.	-	.	ID=Dca22915.1;Parent=Dca22915
scaffold2293	Augus-PASA	exon	30663	30716	.	-	.	ID=Dca22915.1.exon1;Parent=Dca22915.1
scaffold2293	Augus-PASA	exon	30804	30872	.	-	.	ID=Dca22915.1.exon2;Parent=Dca22915.1
scaffold2293	Augus-PASA	exon	30975	31037	.	-	.	ID=Dca22915.1.exon3;Parent=Dca22915.1
scaffold2293	Augus-PASA	exon	31155	31256	.	-	.	ID=Dca22915.1.exon4;Parent=Dca22915.1
scaffold2293	Augus-PASA	exon	31371	31565	.	-	.	ID=Dca22915.1.exon5;Parent=Dca22915.1
scaffold2293	Augus-PASA	exon	31655	31717	.	-	.	ID=Dca22915.1.exon6;Parent=Dca22915.1
scaffold2293	Augustus	exon	32086	32265	.	-	.	ID=Dca22915.1.exon7;Parent=Dca22915.1
scaffold2293	Augustus	exon	32360	32464	.	-	.	ID=Dca22915.1.exon8;Parent=Dca22915.1
scaffold2293	Augustus	exon	32566	32688	.	-	.	ID=Dca22915.1.exon9;Parent=Dca22915.1
scaffold2293	Augustus	exon	33239	33452	.	-	.	ID=Dca22915.1.exon10;Parent=Dca22915.1
scaffold2293	Augustus	exon	35196	35710	.	-	.	ID=Dca22915.1.exon11;Parent=Dca22915.1