Carnation DB

Dca22937.1

Annotation

5-exons
f-1
sp|A5BJ76_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_020910#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold2295)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22937.1	452	1289	1289	31.41	838	46	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BJ76_VITVI	1	897	993	90.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22937.1	459	797	1289	7.75	339	30	2e-50
Target_name	Start	End	Length	Cov(%)
Os08t0202300-03	7	340	591	56.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2295	Augustus	mRNA	13784	18945	.	+	.	ID=Dca22937.1;Parent=Dca22937
scaffold2295	Augustus	exon	13784	14122	.	+	.	ID=Dca22937.1.exon1;Parent=Dca22937.1
scaffold2295	Augustus	exon	14929	15425	.	+	.	ID=Dca22937.1.exon2;Parent=Dca22937.1
scaffold2295	Augustus	exon	15552	15934	.	+	.	ID=Dca22937.1.exon3;Parent=Dca22937.1
scaffold2295	Augustus	exon	16007	17178	.	+	.	ID=Dca22937.1.exon4;Parent=Dca22937.1
scaffold2295	Augustus	exon	17467	18945	.	+	.	ID=Dca22937.1.exon5;Parent=Dca22937.1