Carnation DB

Dca23114.1

Annotation

6-exons
f-1
sp|B9GLW1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_829314#GO:0005634;GO:0043565#1F0P1C
AT3G12480.1 | Symbols: NF-YC11 | nuclear factor Y, subunit C11 | chr3:3958065-3960278 FORWARD LENGTH=293
Repeat List (scaffold2304)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23114.1	1	276	286	56.64	276	58	2e-63
Target_name	Start	End	Length	Cov(%)
sp\|B9GLW1_POPTR	1	271	282	96.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23114.1	1	126	286	33.56	126	73	2e-51
Target_name	Start	End	Length	Cov(%)
AT3G12480.1	1	132	293	45.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2304	Augus-PASA	mRNA	41244	45897	.	-	.	ID=Dca23114.1;Parent=Dca23114
scaffold2304	Augus-PASA	exon	41244	41729	.	-	.	ID=Dca23114.1.exon1;Parent=Dca23114.1
scaffold2304	Augus-PASA	exon	42950	43007	.	-	.	ID=Dca23114.1.exon2;Parent=Dca23114.1
scaffold2304	Augus-PASA	exon	43118	43234	.	-	.	ID=Dca23114.1.exon3;Parent=Dca23114.1
scaffold2304	Augus-PASA	exon	43710	43803	.	-	.	ID=Dca23114.1.exon4;Parent=Dca23114.1
scaffold2304	Augus-PASA	exon	43889	43961	.	-	.	ID=Dca23114.1.exon5;Parent=Dca23114.1
scaffold2304	Augus-PASA	exon	45865	45897	.	-	.	ID=Dca23114.1.exon6;Parent=Dca23114.1