Carnation DB

Dca2316.1

Annotation

6-exons
f-1
sp|A5AM76_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_022361#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold10788)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2316.1	78	767	780	46.41	690	52	0
Target_name	Start	End	Length	Cov(%)
sp\|A5AM76_VITVI	235	894	928	71.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca2316.1	629	767	780	5.25	139	30	2e-09
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	1145	1284	1539	9.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10788	Augustus	mRNA	2683	9547	.	-	.	ID=Dca2316.1;Parent=Dca2316
scaffold10788	Augustus	exon	2683	3719	.	-	.	ID=Dca2316.1.exon1;Parent=Dca2316.1
scaffold10788	Augustus	exon	4927	4973	.	-	.	ID=Dca2316.1.exon2;Parent=Dca2316.1
scaffold10788	Augustus	exon	6898	7346	.	-	.	ID=Dca2316.1.exon3;Parent=Dca2316.1
scaffold10788	Augustus	exon	7399	8307	.	-	.	ID=Dca2316.1.exon4;Parent=Dca2316.1
scaffold10788	Augustus	exon	8393	8549	.	-	.	ID=Dca2316.1.exon5;Parent=Dca2316.1
scaffold10788	Augustus	exon	8769	9547	.	-	.	ID=Dca2316.1.exon6;Parent=Dca2316.1