Dca23180.1
Annotation
- 4-exons
- f-1
- sp|B9I1L1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_822941#GO:0004197;GO:0006508#1F1P0C
- AT1G09850.1 | Symbols: XBCP3 | xylem bark cysteine peptidase 3 | chr1:3201848-3203875 FORWARD LENGTH=437
- Repeat List (scaffold231)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23180.1 |
40 |
439 |
439 |
53.53 |
400 |
52 |
4e-122
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I1L1_POPTR |
47 |
503 |
503 |
90.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23180.1 |
41 |
403 |
439 |
37.12 |
363 |
40 |
8e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G09850.1 |
30 |
417 |
437 |
88.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold231 |
Augustus |
mRNA |
197855 |
199599 |
. |
- |
. |
ID=Dca23180.1;Parent=Dca23180 |
| scaffold231 |
Augustus |
exon |
197855 |
197989 |
. |
- |
. |
ID=Dca23180.1.exon1;Parent=Dca23180.1 |
| scaffold231 |
Augustus |
exon |
198078 |
198569 |
. |
- |
. |
ID=Dca23180.1.exon2;Parent=Dca23180.1 |
| scaffold231 |
Augustus |
exon |
198658 |
198911 |
. |
- |
. |
ID=Dca23180.1.exon3;Parent=Dca23180.1 |
| scaffold231 |
Augustus |
exon |
199161 |
199599 |
. |
- |
. |
ID=Dca23180.1.exon4;Parent=Dca23180.1 |
