Dca23195.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2312)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23195.1 |
2 |
206 |
237 |
30.8 |
205 |
30 |
3e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
44 |
289 |
1501 |
16.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23195.1 |
159 |
207 |
237 |
8.43 |
49 |
39 |
5e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0111000-01 |
847 |
898 |
952 |
5.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2312 |
Augustus |
mRNA |
32473 |
33297 |
. |
- |
. |
ID=Dca23195.1;Parent=Dca23195 |
| scaffold2312 |
Augustus |
exon |
32473 |
32916 |
. |
- |
. |
ID=Dca23195.1.exon1;Parent=Dca23195.1 |
| scaffold2312 |
Augustus |
exon |
33028 |
33297 |
. |
- |
. |
ID=Dca23195.1.exon2;Parent=Dca23195.1 |
