Dca23213.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold23149)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23213.1 |
36 |
473 |
473 |
34.88 |
438 |
32 |
7e-70
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
103 |
617 |
1501 |
34.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23213.1 |
290 |
473 |
473 |
12.89 |
184 |
33 |
7e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
119 |
306 |
707 |
26.59 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold23149 |
Augustus |
mRNA |
1 |
1750 |
. |
- |
. |
ID=Dca23213.1;Parent=Dca23213 |
| scaffold23149 |
Augustus |
exon |
1 |
582 |
. |
- |
. |
ID=Dca23213.1.exon1;Parent=Dca23213.1 |
| scaffold23149 |
Augustus |
exon |
840 |
1628 |
. |
- |
. |
ID=Dca23213.1.exon2;Parent=Dca23213.1 |
| scaffold23149 |
Augustus |
exon |
1702 |
1750 |
. |
- |
. |
ID=Dca23213.1.exon3;Parent=Dca23213.1 |
