Dca23220.1
Annotation
- 3-exons
- f-1
- sp|F2DFU0_HORVD#Predicted protein#Hordeum vulgare var distichum (Two-rowed barley)#unknown#unknown#0F0P0C
- AT1G53260.1 | Symbols: | LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: cobalt ion binding (TAIR:AT3G15000.1); Has 32763 Blast hits to 18534 proteins in 929 species: Archae - 22; Bacteria - 2420; Metazoa - 15140; Fungi - 5401; Plants - 5313; Viruses - 485; Other Eukaryotes - 3982 (source: NCBI BLink). | chr1:19859393-19860421 REVERSE LENGTH=271
- Repeat List (scaffold2316)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23220.1 |
1 |
96 |
294 |
19.72 |
96 |
56 |
4e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F2DFU0_HORVD |
129 |
230 |
415 |
24.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23220.1 |
1 |
188 |
294 |
28.91 |
188 |
41 |
4e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G53260.1 |
1 |
195 |
271 |
71.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2316 |
Augustus |
mRNA |
5267 |
6667 |
. |
- |
. |
ID=Dca23220.1;Parent=Dca23220 |
| scaffold2316 |
Augustus |
exon |
5267 |
5994 |
. |
- |
. |
ID=Dca23220.1.exon1;Parent=Dca23220.1 |
| scaffold2316 |
Augustus |
exon |
6429 |
6497 |
. |
- |
. |
ID=Dca23220.1.exon2;Parent=Dca23220.1 |
| scaffold2316 |
Augustus |
exon |
6580 |
6667 |
. |
- |
. |
ID=Dca23220.1.exon3;Parent=Dca23220.1 |
