Dca23236.1
Annotation
- 3-exons
- f-1
- sp|Q9ZQQ3_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g14400#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold2318)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23236.1 |
125 |
418 |
452 |
32.74 |
294 |
44 |
2e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQQ3_ARATH |
521 |
856 |
1466 |
22.91 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23236.1 |
127 |
314 |
452 |
13.93 |
188 |
32 |
7e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
78 |
275 |
591 |
33.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2318 |
Augustus |
mRNA |
23877 |
26693 |
. |
+ |
. |
ID=Dca23236.1;Parent=Dca23236 |
| scaffold2318 |
Augustus |
exon |
23877 |
24255 |
. |
+ |
. |
ID=Dca23236.1.exon1;Parent=Dca23236.1 |
| scaffold2318 |
Augustus |
exon |
25036 |
25588 |
. |
+ |
. |
ID=Dca23236.1.exon2;Parent=Dca23236.1 |
| scaffold2318 |
Augustus |
exon |
26267 |
26693 |
. |
+ |
. |
ID=Dca23236.1.exon3;Parent=Dca23236.1 |
