Carnation DB

Dca23259.1

Annotation

5-exons
f-1
sp|D7TC57_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g05760#unknown#0F0P0C
AT3G53270.1 | Symbols: | Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein | chr3:19750406-19752168 REVERSE LENGTH=280
Repeat List (scaffold232)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23259.1	4	184	201	49.75	181	56	2e-56
Target_name	Start	End	Length	Cov(%)
sp\|D7TC57_VITVI	1	181	281	64.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23259.1	4	186	201	44.77	183	50	2e-47
Target_name	Start	End	Length	Cov(%)
AT3G53270.1	1	181	280	64.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold232	Augustus	mRNA	66490	68003	.	-	.	ID=Dca23259.1;Parent=Dca23259
scaffold232	Augustus	exon	66490	66589	.	-	.	ID=Dca23259.1.exon1;Parent=Dca23259.1
scaffold232	Augus-PASA	exon	66688	66886	.	-	.	ID=Dca23259.1.exon2;Parent=Dca23259.1
scaffold232	Augustus	exon	67188	67301	.	-	.	ID=Dca23259.1.exon3;Parent=Dca23259.1
scaffold232	Augustus	exon	67616	67742	.	-	.	ID=Dca23259.1.exon4;Parent=Dca23259.1
scaffold232	Augustus	exon	67938	68003	.	-	.	ID=Dca23259.1.exon5;Parent=Dca23259.1