Carnation DB

Dca23279.1

Annotation

12-exons
f-1
sp|C6TH05_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0005634;GO:0003684;GO:0006289;GO:0043161#1F2P1C
sp|B9RSK8_RICCO#Uv excision repair protein rad23, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1725680#GO:0005634;GO:0003684;GO:0006289;GO:0043161#1F2P1C
Repeat List (scaffold2321)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23279.1	1	384	392	68.87	384	66	8e-144
Target_name	Start	End	Length	Cov(%)
sp\|C6TH05_SOYBN	1	399	400	99.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23279.1	1	384	392	68.36	384	63	2e-140
Target_name	Start	End	Length	Cov(%)
AT3G02540.1	1	418	419	99.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2321	Augus-PASA	mRNA	8463	13234	.	+	.	ID=Dca23279.1;Parent=Dca23279
scaffold2321	Augus-PASA	exon	8463	8528	.	+	.	ID=Dca23279.1.exon1;Parent=Dca23279.1
scaffold2321	Augus-PASA	exon	10061	10222	.	+	.	ID=Dca23279.1.exon2;Parent=Dca23279.1
scaffold2321	Augus-PASA	exon	10630	10677	.	+	.	ID=Dca23279.1.exon3;Parent=Dca23279.1
scaffold2321	Augus-PASA	exon	10808	10869	.	+	.	ID=Dca23279.1.exon4;Parent=Dca23279.1
scaffold2321	Augus-PASA	exon	10993	11049	.	+	.	ID=Dca23279.1.exon5;Parent=Dca23279.1
scaffold2321	Augus-PASA	exon	11201	11381	.	+	.	ID=Dca23279.1.exon6;Parent=Dca23279.1
scaffold2321	Augus-PASA	exon	11947	12108	.	+	.	ID=Dca23279.1.exon7;Parent=Dca23279.1
scaffold2321	Augus-PASA	exon	12228	12293	.	+	.	ID=Dca23279.1.exon8;Parent=Dca23279.1
scaffold2321	Augus-PASA	exon	12372	12419	.	+	.	ID=Dca23279.1.exon9;Parent=Dca23279.1
scaffold2321	Augus-PASA	exon	12510	12619	.	+	.	ID=Dca23279.1.exon10;Parent=Dca23279.1
scaffold2321	Augus-PASA	exon	12762	12840	.	+	.	ID=Dca23279.1.exon11;Parent=Dca23279.1
scaffold2321	Augus-PASA	exon	13097	13234	.	+	.	ID=Dca23279.1.exon12;Parent=Dca23279.1