Carnation DB

Dca23301.1

Annotation

7-exons
f-1
sp|B9RMT2_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1083470#unknown#0F0P0C
Repeat List (scaffold2324)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23301.1	34	788	789	37.64	755	39	3e-158
Target_name	Start	End	Length	Cov(%)
sp\|B9RMT2_RICCO	3	700	701	99.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23301.1	50	787	789	31.3	738	33	1e-110
Target_name	Start	End	Length	Cov(%)
AT3G01680.1	34	727	740	93.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2324	Augus-PASA	mRNA	24000	29823	.	-	.	ID=Dca23301.1;Parent=Dca23301
scaffold2324	Augus-PASA	exon	24000	24629	.	-	.	ID=Dca23301.1.exon1;Parent=Dca23301.1
scaffold2324	Augustus	exon	24755	25452	.	-	.	ID=Dca23301.1.exon2;Parent=Dca23301.1
scaffold2324	Augustus	exon	25544	25653	.	-	.	ID=Dca23301.1.exon3;Parent=Dca23301.1
scaffold2324	Augustus	exon	26524	26972	.	-	.	ID=Dca23301.1.exon4;Parent=Dca23301.1
scaffold2324	Augustus	exon	27053	27169	.	-	.	ID=Dca23301.1.exon5;Parent=Dca23301.1
scaffold2324	Augustus	exon	27255	27311	.	-	.	ID=Dca23301.1.exon6;Parent=Dca23301.1
scaffold2324	Augustus	exon	29515	29823	.	-	.	ID=Dca23301.1.exon7;Parent=Dca23301.1