Dca23350.1
Annotation
- 4-exons
- f-1
- sp|B9GWE6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830825#GO:0016021;GO:0004252;GO:0006508#1F1P1C
- Os08t0546700-01 Peptidase S54, rhomboid domain containing protein.
- Repeat List (scaffold233)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23350.1 |
1 |
224 |
226 |
67.25 |
224 |
68 |
4e-90
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GWE6_POPTR |
96 |
319 |
321 |
69.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23350.1 |
1 |
226 |
226 |
68.14 |
226 |
68 |
1e-88
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0546700-01 |
98 |
323 |
324 |
69.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold233 |
Augustus |
mRNA |
9061 |
10110 |
. |
+ |
. |
ID=Dca23350.1;Parent=Dca23350 |
| scaffold233 |
Augustus |
exon |
9061 |
9214 |
. |
+ |
. |
ID=Dca23350.1.exon1;Parent=Dca23350.1 |
| scaffold233 |
Augustus |
exon |
9409 |
9572 |
. |
+ |
. |
ID=Dca23350.1.exon2;Parent=Dca23350.1 |
| scaffold233 |
Augustus |
exon |
9664 |
9914 |
. |
+ |
. |
ID=Dca23350.1.exon3;Parent=Dca23350.1 |
| scaffold233 |
Augustus |
exon |
9999 |
10110 |
. |
+ |
. |
ID=Dca23350.1.exon4;Parent=Dca23350.1 |
