Carnation DB

Dca23457.1

Annotation

6-exons
f-1
sp|B9HUX1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_770625#GO:0008236;GO:0006508#1F1P0C
Os01t0767100-01 Similar to Lysosomal Pro-X carboxypeptidase.
Repeat List (scaffold2340)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23457.1	22	224	239	38.91	203	39	1e-33
Target_name	Start	End	Length	Cov(%)
sp\|B9HUX1_POPTR	65	300	513	46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23457.1	25	224	239	36.82	200	37	7e-29
Target_name	Start	End	Length	Cov(%)
Os01t0767100-01	52	287	518	45.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2340	Augustus	mRNA	35656	40240	.	-	.	ID=Dca23457.1;Parent=Dca23457
scaffold2340	Augustus	exon	35656	35746	.	-	.	ID=Dca23457.1.exon1;Parent=Dca23457.1
scaffold2340	Augustus	exon	36059	36129	.	-	.	ID=Dca23457.1.exon2;Parent=Dca23457.1
scaffold2340	Augustus	exon	36327	36394	.	-	.	ID=Dca23457.1.exon3;Parent=Dca23457.1
scaffold2340	Augustus	exon	37080	37266	.	-	.	ID=Dca23457.1.exon4;Parent=Dca23457.1
scaffold2340	Augustus	exon	39200	39435	.	-	.	ID=Dca23457.1.exon5;Parent=Dca23457.1
scaffold2340	Augustus	exon	40174	40240	.	-	.	ID=Dca23457.1.exon6;Parent=Dca23457.1