Carnation DB

Dca23461.1

Annotation

6-exons
f-1
sp|B9N6I3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_828301#unknown#0F0P0C
AT2G32840.1 | Symbols: | proline-rich family protein | chr2:13933101-13934836 REVERSE LENGTH=337
Repeat List (scaffold2341)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23461.1	137	269	272	27.57	133	57	1e-30
Target_name	Start	End	Length	Cov(%)
sp\|B9N6I3_POPTR	208	336	340	37.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23461.1	142	268	272	25.73	127	54	2e-31
Target_name	Start	End	Length	Cov(%)
AT2G32840.1	206	337	337	39.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2341	Augustus	mRNA	22851	27556	.	-	.	ID=Dca23461.1;Parent=Dca23461
scaffold2341	Augustus	exon	22851	22956	.	-	.	ID=Dca23461.1.exon1;Parent=Dca23461.1
scaffold2341	Augustus	exon	23924	24003	.	-	.	ID=Dca23461.1.exon2;Parent=Dca23461.1
scaffold2341	Augustus	exon	24811	24909	.	-	.	ID=Dca23461.1.exon3;Parent=Dca23461.1
scaffold2341	Augustus	exon	25652	25729	.	-	.	ID=Dca23461.1.exon4;Parent=Dca23461.1
scaffold2341	Augustus	exon	26822	26867	.	-	.	ID=Dca23461.1.exon5;Parent=Dca23461.1
scaffold2341	Augustus	exon	27147	27556	.	-	.	ID=Dca23461.1.exon6;Parent=Dca23461.1