Carnation DB

Dca23542.1

Annotation

5-exons
f-1
sp|B9S3Y9_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0557140#GO:0005634;GO:0043565;GO:0003700#2F0P1C
AT4G03090.1 | Symbols: | sequence-specific DNA binding;sequence-specific DNA binding transcription factors | chr4:1366495-1370937 REVERSE LENGTH=913
Repeat List (scaffold2350)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23542.1	1	195	217	55.76	195	62	7e-61
Target_name	Start	End	Length	Cov(%)
sp\|B9S3Y9_RICCO	59	253	957	20.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23542.1	1	195	217	38.7	195	42	5e-36
Target_name	Start	End	Length	Cov(%)
AT4G03090.1	51	244	913	21.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2350	Augustus	mRNA	48910	51371	.	+	.	ID=Dca23542.1;Parent=Dca23542
scaffold2350	Augustus	exon	48910	49062	.	+	.	ID=Dca23542.1.exon1;Parent=Dca23542.1
scaffold2350	Augustus	exon	49467	49550	.	+	.	ID=Dca23542.1.exon2;Parent=Dca23542.1
scaffold2350	Augustus	exon	50205	50333	.	+	.	ID=Dca23542.1.exon3;Parent=Dca23542.1
scaffold2350	Augustus	exon	50613	50831	.	+	.	ID=Dca23542.1.exon4;Parent=Dca23542.1
scaffold2350	Augustus	exon	51303	51371	.	+	.	ID=Dca23542.1.exon5;Parent=Dca23542.1