Carnation DB

Dca23550.1

Annotation

5-exons
f-1
sp|Q2QSV4_ORYSJ#Transposon protein, putative, CACTA, En/Spm sub-class, expressed#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g22810#unknown#0F0P0C
Repeat List (scaffold2351)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23550.1	232	1231	1238	32.79	1000	37	0
Target_name	Start	End	Length	Cov(%)
sp\|Q2QSV4_ORYSJ	1	1042	1667	62.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23550.1	232	1056	1238	24.87	825	36	1e-154
Target_name	Start	End	Length	Cov(%)
Os08t0208400-02	1	801	829	96.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2351	Augustus	mRNA	34913	40074	.	+	.	ID=Dca23550.1;Parent=Dca23550
scaffold2351	Augustus	exon	34913	35603	.	+	.	ID=Dca23550.1.exon1;Parent=Dca23550.1
scaffold2351	Augustus	exon	36512	38774	.	+	.	ID=Dca23550.1.exon2;Parent=Dca23550.1
scaffold2351	Augustus	exon	38882	38941	.	+	.	ID=Dca23550.1.exon3;Parent=Dca23550.1
scaffold2351	Augustus	exon	39017	39236	.	+	.	ID=Dca23550.1.exon4;Parent=Dca23550.1
scaffold2351	Augustus	exon	39592	40074	.	+	.	ID=Dca23550.1.exon5;Parent=Dca23550.1