Carnation DB

Dca23603.1

Annotation

11-exons
f-1
sp|F6HZ65_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g00740#GO:0004553;GO:0005975#1F1P0C
sp|B9GSC6_POPTR#Glycosyl hydrolase family 9#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_850247#GO:0004553;GO:0005975#1F1P0C
Repeat List (scaffold2359)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23603.1	17	341	627	35.4	325	69	1e-120
Target_name	Start	End	Length	Cov(%)
sp\|F6HZ65_VITVI	23	311	511	56.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23603.1	40	341	627	33.33	302	70	2e-113
Target_name	Start	End	Length	Cov(%)
AT4G02290.1	48	316	516	52.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2359	Augustus	mRNA	1248	6545	.	-	.	ID=Dca23603.1;Parent=Dca23603
scaffold2359	Augustus	exon	1248	1580	.	-	.	ID=Dca23603.1.exon1;Parent=Dca23603.1
scaffold2359	Augustus	exon	1658	1821	.	-	.	ID=Dca23603.1.exon2;Parent=Dca23603.1
scaffold2359	Augustus	exon	1949	2060	.	-	.	ID=Dca23603.1.exon3;Parent=Dca23603.1
scaffold2359	Augustus	exon	2135	2296	.	-	.	ID=Dca23603.1.exon4;Parent=Dca23603.1
scaffold2359	Augustus	exon	2676	2771	.	-	.	ID=Dca23603.1.exon5;Parent=Dca23603.1
scaffold2359	Augustus	exon	3019	3180	.	-	.	ID=Dca23603.1.exon6;Parent=Dca23603.1
scaffold2359	Augustus	exon	3418	3513	.	-	.	ID=Dca23603.1.exon7;Parent=Dca23603.1
scaffold2359	Augustus	exon	3626	3721	.	-	.	ID=Dca23603.1.exon8;Parent=Dca23603.1
scaffold2359	Augustus	exon	5435	5635	.	-	.	ID=Dca23603.1.exon9;Parent=Dca23603.1
scaffold2359	Augustus	exon	5725	5931	.	-	.	ID=Dca23603.1.exon10;Parent=Dca23603.1
scaffold2359	Augustus	exon	6291	6545	.	-	.	ID=Dca23603.1.exon11;Parent=Dca23603.1